Thursday, 14 November 2013

Biochemistry Training and Lab Results Interpretation

Google "biochemistry lab results interpretation" to get a list of websites that will help.

Be careful when looking at the protocol and data; some are for animals and not humans.

The medical laboratory technologists (MLTs) are trained by the institution or by other institutions. They perform the lab tests on automated clinical chemistry laboratory analyzers. While most clinical lab tests are performed on automated analyzers, some tests have to be performed manually.

All clinical lab tests have a Quality Control (QC) program and a Quality Assurance Program (QAP) for the lab (UK NEQAS and Australian RCPA-QAP).

Not all clinical labs perform all the lab tests listed below.

Not all clinical labs categorise their lab tests as shown below.

UK and Malaysian clinical labs report lab data in SI Units; USA labs still use old units.

Lab tests are grouped into panels by chemistry, organ, disease, or disease process:
  1. Electrolytes: Sodium, potassium, chloride
  2. Acid-base: Bicarbonate and anion gap, acid-base disturbances
  3. Renal: Urea and creatinine
  4. Minerals: Calcium (total and ionized), phosphate, magnesium
  5. Proteins: Total protein, albumin, globulins, A/G ratio, ammonia, uric acid, electrophoresis
  6. Carbohydrates: Glucose, fructosamine and glycosylated hemoglobin, 
  7. Lipids: Triglycerides, cholesterol, non-esterified fatty acids (NEFA)
  8. Ketones: β-hydroxybutyrate (BHB)
  9. Liver: Enzymes (ALT, AST, SDH, GLDH, LDH, ALP, GGT), bilirubin (total, indirect, direct), bile acids, ammonia
  10. Pancreas: Amylase, lipase
  11. Muscle enzymes: AST, CK, LDH
  12. Iron: Iron, total iron binding capacity, % saturation, ferritin
  13. Interference indexes: Lipemia, hemolysis, icterus

The students of the Masters of Medicine (MMed) 4-year program have a basic MD or MBBS degree and at least 2 years work experience at a hospital before joining the program at the university. Topics covered in the MMed training covers some of the following:

QC and QA
Clinical Lab Management
Clinical Biochemistry (see 1-13 above)
Haematology and Coagulation
Adult Endocrinology
Pediatric Endocrinology
Metabolic Medicine
Nephrology
Neonatology
Cytogenetics
GI & Hepatology
Research
Electives (Toxicology, Nutrition TPN, Genetics)
Hospital posting (field work)

The MMed trainees in Chemical Pathology are competent to interpret lab tests data. These include:
  1. Calcium and metabolic bone disorders
  2. Diabetes mellitus: Plasma glucose, Glucose tolerance test (GTT), HbA1C
  3. Inherited metabolic disorders; Inborn Errors of Metabolism (IEM)
  4. Lipidology/Lipids: HDL, LDL cholesterol, Triglycerides, oxLDL
  5. Cardiovascular risk assessment/Heart attack markers: AST, LDH, Troponins, CKMB, Myoglobin, beta-type natriuretic peptide
  6. Nutrition
  7. Renal disease
  8. Thyroid disease: TRH, TSH, T3 and T4
  9. Liver disorder
  10. Tumour markers: Ca-125, Ca-119, Ca-153, oncogenes and specificity
  11. Arterial blood gases

The clinicians who teach in the MMed program are university lecturers and they serve as laboratory consultants; they also supervise the general running of the clinical lab and are paid a 'critical allowance' for doing so. They have a basic MD/MBBS degree and a postgraduate degree (MSc/MPath/MMed) in Chemical Pathology. At present, none have a PhD degree or FRCPath. None are professors.


External links:

Cornell University

P. Pannall. Pitfalls in the Interpretation of Blood Chemistry Results. S. Afr. Med. J., 45, 1184 (1971).

Errors in Clinical Biochemistry (Nursing perspectives)

Lab Tests Online. American Association for Clinical Chemistry

Analytical and Interpretative Service (Biochemistry). 17 Sept 2012. Updated 14 Nov 2013. NHS UK

Interpretation of clinical laboratory tests (PowerPoint)

Study of Tissue Morphology by Electron Microscopy

Microwave Techniques for Electron Microscopy (Springer)

Ortho Molecular Nutrition & Wellness Center

eHow

MyBookez

Newport

Lab Info

Buzzle

AARP

Wikipedia - http://www.ganfyd.org/index.php?title=Laboratory_results:_normal_ranges

Biochemia Medica. Croatian Society of Medical Biochemistry and Laboratory Medicine

Interpreting Paediatric Biochemistry Results

Interpretation of Lab Test Profiles
Edward O. Uthman, MD; Diplomate, American Board of Pathology
Last update 6 Jan 2002. Copyright 1994-98
http://web2.airmail.net/uthman/lab_test.html

YouTube VIDEOS - Introduction to Lab Tests
http://www.youtube.com/watch?v=_mGszRbve9s

YouTube VIDEOS - Blood Tests Interpretation
http://www.youtube.com/watch?v=9UaiPovkxbk

LFT - http://www.youtube.com/watch?v=8B2a-HZEqtY
Fatty Liver - http://www.youtube.com/watch?v=n4qkXgAX6Jg

YouTube VIDEOS - Venepuncture
Need a new video on venepuncture

YouTube VIDEOS - Lipids
http://www.youtube.com/watch?v=_jjk13K47uo

YouTube VIDEOS - ABG Sampling
http://www.youtube.com/watch?v=xfso_M7pn9E
http://www.youtube.com/watch?v=KbszTXeg71g
http://www.youtube.com/watch?v=XCe_qzXFAPM

YouTube VIDEOS - Interpretation of ABG
http://www.youtube.com/watch?v=f7E-s95tbsE

YouTube VIDEOS - Acid & Base
https://www.youtube.com/watch?v=WHTxkedhxA8

YouTube VIDEOS - Electrolyte Imbalance
https://www.youtube.com/watch?v=XkiJcLQdjR8

YouTube VIDEOS - Renal
https://www.youtube.com/watch?v=JKKpvuV5HY8

JOURNALS

Verras, P and Greaves, R. 2005. Abnormal laboratory results: Interpreting paediatric biochemistry results. Australian Prescriber, vol. 28, no. 5, pp. 126-129.
RMIT University Research Bank http://researchbank.rmit.edu.au/view/rmit:19732
http://www.australianprescriber.com/magazine/28/5/126/9/

CG Fraser and Y Fogarty. 1989. Interpreting laboratory results. BMJ. 24 June; 298(6689): 1659-1660.
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1836738/

TRAINING PROGRAMS AND MANUALS

Clinical Biochemistry Residency Program. Information Booklet. June 2009
Oman Medical Specialty Board. Al Athaiba, Sultanate of Oman
www.omsb.org
Email: biochemistry@omsb.org and omsb@omsb.org
http://www.omsb.org/Files/Biochemistry/Biochemistry_INFORMATION__BOOKLET.pdf

A Clinical Biochemistry Laboratory Training Module for Technicians
Dr Jagarati Jha
Dept of Biochemistry
SMS Hospital, Jaipur, India
http://www.rmsc.nic.in/pdf/Training%20Module%20-%20Biochemistry.pdf

Chemistry 422: Biochemistry Laboratory Manual
Mark Brandt, PhD
Third edition, January 2002
Dept of Chemistry and Biochemistry
California State University, Fullerton, California, USA
http://www.rose-hulman.edu/~brandt/publications/422_Manual_3rd_Ed.pdf

Introduction to Clinical Biochemistry: Interpreting Blood Results. 2011.
Dr. Graham Basten
Copyright Dr. Graham Basten & Ventus Publishing ApS
ISBN 978-87-7681-673-5
Download free books at bookboon.com
http://tailieu.vn/doc/introduction-to-clinical-biochemistry-interpreting-blood-results.1301732.html

The LabAssist Report Made Simple
Copyright 2008 Lab Interpretation LLC
http://www.labinterpretation.com
http://labinterpretation.com/files/LabAssistInterpretationManual.pdf
http://labinterpretation.com/

Carramar Education Courses
Carramar Consulting Pty Ltd
ABN 64 116 505 134
Unit 8, 220 Boundary Street
Spring Hill Qld 4000 Australia
Telephone: +61 7 3832 7727
Email: admin@carramarconsulting.com.au
http://www.carramarconsulting.com.au/consulting_and_advisory

BOOKS

Practical Clinical Biochemistry
Harold Varley
5th edition 1984

Clinical Biochemistry Principle and Practice.
Praful B. Godkar
1994

Tietz Textbook of Clinical Chemistry
2ne edition'1994

Micro Analysis in Medical Biochemistry
Editor, IDP Wooten
6th edition

Practical Biochemistry
RC Gupta
3rd edition 2004

Hawk's Physiological Chemistry
Editor, Osler
14th edition

Lecture Notes on Clinical Chemistry
Whitby, Robb and Smith
2nd edition

Clinical Biochemistry Illustrated
Allan Gaw
2nd edition 1999

Clinical Chemistry & Metabolic Medicine
7th Edition
Martin A. Crook
2006
ISBN 0-340-90617-0
Hodder Arnold Publisher

Clinical Biochemistry, Metabolic and Clinical Aspects
1st Edition
William J. Marshall and Stephen K. Bangert
Churchill Livingstone Publisher
ISBN 0443-043418

Analytical Biochemistry
3rd Edition
David J. Holme and Hazel Peck
Prince Hall Publisher
ISBN 978-0-582-29438-7

Clinical Chemistry
Ken Lewandrowsky
ISBN 0683-30085-7

Basic QC Practices Manual
Westgaard

Monday, 11 November 2013

Removing gallstones naturally


Natural & Safe Method Of Removing Gallstones Without Surgery – 6-Day Method by Dr Lai Chiu-Nan

Gallstones may not be everyone’s concern but may lead to cancer. We all have them (big or small, many or few). “Cancer is never the 1st illness. There are a lot of other problems leading to cancer. I came across some materials stating that people with cancer usually had stones,” said Dr Lee of China.

One symptom of gallstones is a feeling of bloatedness after a heavy meal as if you can’t digest the food. If it gets more serious, you feel pain in the liver area.”

Dr Lee offers the apple juice treatment which is good for those with a weak liver. Liver and gallbladder are closely linked.

1) Drink 1 glass (250ml) 100% apple juice 4 times a day for 5 days. 1 glass at breakfast, 1 glass at lunch, 1 glass at dinner & 1 glass before going to bed. It softens the gallstones. Eat normally.

2) On the 6th day, skip dinner. At 6pm, take a teaspoon of Epsom salt (magnesium sulphate) with a glass of warm water. At 8 PM, repeat the same for purging purpose. It helps to flush out all solid stuff. It also opens the gallbladder ducts. At 10 PM, drink half a glass of olive oil mixed with half a glass of lemon juice. The oil lubricates the stones to ease their passage. Lemon juice helps to extract the stones out from gallbladder ducts.

Please also Google 'Gallstelax Remedy' to obtain natural ways of removing gallstones.
Sources:
Facebook: Daily Health Tips - https://www.facebook.com/HealthLifePro
http://www.way2medicare.blogspot.com/

External links:
Gallstones - Natural treatments
Dr Judy Seeger - How to do a simple gallbladder diet
14 Foods that cleanse the liver
Liver and gallbladder cleanse
Healthline.com: gallstones

Monday, 28 October 2013

Cleaning the Liver and Gallbladder

Gallstones can form anywhere in the body, mainly in the liver and gallbladder. Gallstones in the gallbladder are often detected via abdominal ultrasound. However, intrahepatic stones or gallstones in the hepatic biliary duct (liver stones) are often undetected and undiagnosed. They are the culprit of many modern day diseases that we see today. The liver function tests (LFT) may appear normal even though the failing liver is heavily congested with fats and gallstones. Fatty liver is a manifestation of a congested liver and needs cleansing if the liver is to continue to serve as a detox organ. Othwerwise, we die faster due to liver failure.

Weight loss and not eating for long periods are a leading cause for liver stones (intrahepatic gallstones).

There are many ways to clean the liver and gallbladder naturally. Dr Eden offers the Pulverexx Protocol. Andreas Moritz offers a book on how to DIY flush (cleanse) the liver and gallbladder of toxins, based on Ayyurveda. Both procedures will revitalise the liver and give a better quality of life (QOL).


External links
http://www.doctoreden.com/
http://www.doctoreden.com/gallbladder-liver-detox
http://www.ener-chi.com/books/the-amazing-liver-gallbladder-flush/
http://www.healthline.com/human-body-maps/gallbladder

Moritz A.. The Amazing Liver And Gallbladder Flush, Ener-Chi.com (2005), p. 20

Laparoscopic Cholecystectomy (gallbladder removal)



Introduction

Cholecystectomy is the surgical removal of the gallbladder. It is a common treatment of symptomatic gallstones and other gallbladder conditions. Surgical options include the standard procedure, called laparoscopic cholecystectomy, and an older more invasive procedure, called open cholecystectomy.

Indications

Indications for cholecystectomy include inflammation of the gallbladder (cholecystitis), biliary colic, risk factors for gallbladder cancer, and pancreatitis caused by gallstones.

Cholecystectomy is the recommended treatment the first time a person is admitted to hospital for cholecystitis.

Cholecystitis may be acute or chronic, and may or may not involve the presence of gallstones.

Risk factors for gallbladder cancer include a "porcelain gallbladder," or calcium deposits in the wall of the gallbladder, and an abnormal pancreatic duct.

Cholecystectomy can prevent the relapse of pancreatitis that is caused by gallstones that block the common bile duct.

Laparoscopic surgery

Laparoscopic cholecystectomy has now replaced open cholecystectomy as the first-choice of treatment for gallstones and inflammation of the gallbladder unless there are contraindications to the laparoscopic approach. This is because open surgery leaves the patient more prone to infection. Sometimes, a laparoscopic cholecystectomy will be converted to an open cholecystectomy for technical reasons or safety.

Laparoscopic cholecystectomy requires 4 small incisions in the abdomen to allow the insertion of operating ports, small cylindrical tubes approximately 5 to 10 mm in diameter, through which surgical instruments and a video camera are placed into the abdominal cavity. The camera illuminates the surgical field and sends a magnified image from inside the body to a video monitor, giving the surgeon a close-up view of the organs and tissues. The surgeon watches the monitor and performs the operation by manipulating the surgical instruments through the operating ports.

To begin the operation, the patient is placed in the supine position on the operating table and anesthetized. A scalpel is used to make a small incision at the umbilicus. Using either a Veress needle or Hasson technique, the abdominal cavity is entered. The surgeon inflates the abdominal cavity with carbon dioxide (CO2 gas) to create a working space. The camera is placed through the umbilical port and the abdominal cavity is inspected. Additional ports are opened inferior to the ribs at the epigastric, midclavicular, and anterior axillary positions. The gallbladder fundus is identified, grasped, and retracted superiorly. With a second grasper, the gallbladder infundibulum is retracted laterally to expose and open Calot's Triangle (cystic artery, cystic duct, and common hepatic duct). The triangle is gently dissected to clear the peritoneal covering and obtain a view of the underlying structures. The cystic duct and the cystic artery are identified, clipped with tiny titanium clips and cut. Then the gallbladder is dissected away from the liver bed and removed through one of the ports. This type of surgery requires meticulous surgical skill, but in straightforward cases, it can be done in about an hour.

Recently, this procedure is performed through a single incision in the patient's umbilicus. This advanced technique is called Laparoendoscopic Single Site Surgery or "LESS" or Single Incision Laparoscopic Surgery or "SILS". In this procedure, instead of making 3-4 four small different cuts (incisions), a single cut (incision) is made through the navel (umbilicus). Through this cut, specialized rotaculating instruments (straight instruments which can be bent once inside the tummy) are inserted to do the operation. The advantage of LESS / SILS operation is that the number of cuts are further reduced to one and this cut is also not visible after the operation is done as it is hidden inside the navel. A meta-analysis published by Pankaj Garg et al comparing conventional laparoscopic cholecystecomy to SILS Cholecystectomy demonstrated that SILS does have a cosmetic benefit over convention four-hole laparoscopic cholecystectomy while having no advantage in postoperative pain and hospital stay.

Procedural risks and complications

Laparoscopic cholecystectomy does not require the abdominal muscles to be cut, resulting in less pain, quicker healing, improved cosmetic results, and fewer complications such as infection and adhesions. Most patients can be discharged on the same or following day as the surgery, and can return to any type of occupation in about a week. Furthermore, flexible instruments are being used in laparoscopic surgery by some surgeons. Using the SPIDER surgical system, they can perform the cholecystectomy through a single incision through the navel. These patients often recover faster than traditional methods, and have an almost invisible scar.

Abdominal peritoneal adhesions, gangrenous gallbladders, and other problems that obscure vision are discovered during about 5% of laparoscopic surgeries, forcing surgeons to switch to the standard cholecystectomy for safe removal of the gallbladder. Adhesions and gangrene can be serious, but converting to open surgery does not equate to a complication.

A Consensus Development Conference panel, convened by the National Institutes of Health in September 1992, endorsed laparoscopic cholecystectomy as a safe and effective surgical treatment for gallbladder removal, equal in efficacy to the traditional open surgery. The panel noted, however, that laparoscopic cholecystectomy should be performed only by experienced surgeons and only on patients who have symptoms of gallstones.

In addition, the panel noted that the outcome of laparoscopic cholecystectomy is greatly influenced by the training, experience, skill, and judgment of the surgeon performing the procedure. Therefore, the panel recommended that strict guidelines be developed for training and granting credentials in laparoscopic surgery, determining competence, and monitoring quality. According to the panel, efforts should continue toward developing a noninvasive approach to gallstone treatment that will not only eliminate existing stones, but also prevent their formation or recurrence.

Injury of common bile duct

An uncommon but potentially serious complication is injury to the common bile duct, which connects the cystic and common hepatic ducts to the duodenum. An injured bile duct can leak bile and cause a painful and potentially dangerous infection. Many cases of minor injury to the common bile duct can be managed non-surgically. Major injury to the bile duct, however, is a very serious problem and may require corrective surgery. This surgery should be performed by an experienced biliary surgeon.

Post-op biliary leak

One common complication of cholecystectomy is inadvertent injury to analogous bile ducts known as Ducts of Luschka, occurring in 33% of the population. It is non-problematic until the gallbladder is removed, and the tiny supravesicular ducts may be incompletely cauterized or remain unobserved, leading to biliary leak post-operatively. The patient will develop biliary peritonitis within 5 to 7 days following surgery, and will require a temporary biliary stent. It is important that the clinician recognize the possibility of bile peritonitis early and confirm diagnosis via HIDA scan to lower morbidity rate. Aggressive pain management and antibiotic therapy should be initiated as soon as diagnosed.

Gallbladder perforation

During laparoscopic cholecystectomy, gallbladder perforation can occur due to excessive traction during retraction or during dissection from the liver bed. It can also occur during extraction from the abdomen. Infected bile, pigment gallstones, male gender, advanced age, perihepatic location of spilled gallstones, more than 15 gallstones and an average size greater than 1.5 cm have been identified as risk factors for complications. Spilled gallstones can be a diagnostic challenge and can cause significant morbidity to the patient. Clear documentation of spillage and explanation to the patient is of utmost importance, as this will enable prompt recognition and treatment of any complications. Prevention of spillage is the best policy.

Biopsy

After removal, the gallbladder should be sent for pathological examination to confirm the diagnosis and look for an incidental cancer. If cancer is present, a reoperation to remove part of the liver and lymph nodes will be required in most cases.

Long-term prognosis

A minority of the population, from 5% to 40%, develop a condition called postcholecystectomy syndrome, or PCS. Symptoms can include gastrointestinal distress and persistent pain in the upper right abdomen.
As many as 20% of patients develop chronic diarrhea. The cause is unclear, but is presumed to involve the disturbance to the bile system. Most cases clear up within weeks or a few months, though in rare cases the condition may last for many years. It can be controlled with medication such as cholestyramine.

Complications

The most serious complication of cholecystectomy is damage to the common bile duct. This occurs in about 0.25% of cases. Damage to the duct that causes leakage typically manifests as fever, jaundice, and abdominal pain several days following cholecystectomy. A lacerated, leaky bile duct may be repaired through a procedure called ERCP, or endoscopic retrograde cholangiopancreatography.

Another complication is when the gallstone is too large to be removed through the large 2-cm incision below the navel. The gallstone needs to be crushed a bit before removal. When this is done, there is tendency for bile leakage. Leaked bile can be an irritant.

Epidemiology

About 600,000 people receive a cholecystectomy in the United States each year.


External links
Wikipedia: "Cholecystectomy."
USC Surgery: "Laparoscopic cholecystectomy."
USC Surgery: "GALLSTONES."
WebMD: "Laparoscopic gallbladder surgery for gallstones."
WebMD: Types of surgery to remove the gallbladder."

Anatomyguy: "Laparoscopic cholecystectomy."
Dr Gamagami: "Laparoscopic Cholescystectomy".
Carolina Surgical: "Gallbladder removal".

Pressreleasepoint: "Do you suffer gallstone - Learn-about-natural-treatment."
Gallbladderdetox.com" Gallbladder-symptoms."
http://www.gallbladderdetox.com/
http://www.doctoreden.com
Healthline.com: gallstones

Gallstones - A guide for pateints, Part 1 - recommendations for surgery
Gallstones - A guide for patients, Part 2 - tells about ERCP, care of wounds and how to bathe after surgery

Laparoscopic cholescystectomy
https://youtu.be/ecQCvZb9qUA - animation

Gallbladder removal - Patient education
https://youtu.be/iD-5Rp6xdzM



Biochemistry Textbooks

I have always been a biochemistry student, facilitator and lecturer. I have taught medical biochemistry since June 1982; this is my 31st year teaching my favourite subject. There is a big difference between what is needed in pure biochemistry and medical biochemistry. Pure biochemistry requires a good knowledge of basic and applied chemistry. Medical biochemistry requires a good knowledge of applications of biochemical and chemical pathology knowledge in clinical cases.

The way biochemistry is heading, students will need to know quite a lot of biochemistry methods and basic & applied knowledge to be able to appreciate the complexity of depth of knowledge we have today about our own bodies and what goes on inside us. That's makes it very interesting when we have access to good books.

I would always suggest students to read up whenever they come across a case that they know little about. It is very gratifying to be able to understand a case at hand fully when they is sufficient material to read, comprehend and explore more. Nothing is ever complete and studying a case is like that.

Textbooks only fill a part of basic reading we need to know. Higher reading materials are those produced by specialised research groups and institutes. These are published as articles in scientific journals and monographs. It will be good to always be on the lookout for developments in any research area and try to understand issues and challenges as and when they are published.

Even though we don't read textbooks once we enter into the workforce, I still think they are necessary once in a while. They are needed to see what the new developments are. We should be reminded that what goes into textbooks have been out there for at least 10 years. So textbooks are backward in this regard. Nevertheless, we need them to teach our students. They will in turn need to turn to journals and more recent research book publications to find out more about recent development and updates.

The language used in the textbooks sometimes confuse students. Here in Malaysia we use British English or UK English spellings and measures. US textbooks use US spellings and measures. I often tell the students the differences so that they are aware.

I noticed that it is easier to read textbooks written in US English as the sentence structure is straight forward. I noticed that textbooks written in UK English are harder to read and comprehend as the sentence structure is not so straight forward. I have seen Stryer written in Korean script. I have seen Biochemistry written in Malaysian Malay. The diagrams matter most when I don't understand the text when it is written in languages other than English.

The following are some of the books I have used and/or evaluated for teaching medical biochemistry to our first year medical and dental students at our medical school. I evaluate books for class use and suggest to students in class or here at my blog. Some are new books. I will add more when they come to my desk and attention.


Title: Basic Medical Biochemistry: A clinical approach.
Author: Dawn B. Marks, Allan D. Marks, Colleen M. Smith
Publisher: Williams & Wilkins, Philadelphia
Textbook: International Edition, 1996
ISBN: 0-683-05595-X
Web: www.wwilkins.com
Email: custserv@wwilkins.com
Language: US English
Purchase date: May 1997 (softcover)
Review:
  1. 2-tone texts, diagrams, titles and highlights (black and green). 
  2. Two-part layout with a bigger column for text and a side column for additional texts, diagrams, reaction pathways, definitions, or cases. 
  3. Well-drawn, clear simplified, annotated diagrams with bold and light texts.
  4. The cases are laid out differently; they are introduced in one chapter and completed in other chapters; it is easy to lose track of the cases. To put an entire case together means flipping through several pages.
  5. Each chapter opens with the scope that will be covered.
  6. Easy to read for first year students.

Title: Essential Biochemistry
Author: Pratt
Publisher: John Wiley & Sons
Year: 2014
ISBN: 1118083504
Complimentary copy was sent from Singapore office for evaluation (hardcover; 27 Oct 2013)
WILEY
BOOK DISTRIBUTION
1 FUSIONOPOLIS WALK
#07-01 SOLARIS SOUTH TOWER
SINGAPORE 138628
TEL. 65 66438000 (MAIN)
TEL. 65 66438333 (CSD HOTLINE)
FAX. 65 66438397
EMAIL. csd_ord@wiley.com

Review:
  1. This is a good book if you need more recent structures on many biochemical compounds. 
  2. Many of the diagrams feature 3D structures which were obtained from research labs
  3. Colourful iStock photos appear at the start of each chapter
  4. Colourful diagrams in most chapters
  5. Very detailed mechanisms in some parts especially on nucleic acids and cell signalling
  6. Detailed calculations for many reactions
  7. Clinical correlates appear at the end of each chapter or section
  8. More updated clinical information compared to many textbooks


Sunday, 27 October 2013

Hypertension

Hypertension (HTN) or high blood pressure, sometimes called arterial hypertension, is a chronic medical condition in which the blood pressure in the arteries is elevated. This requires the heart to work harder than normal to circulate blood through the blood vessels.

Blood pressure is summarised by two measurements, systolic and diastolic, which depend on whether the heart muscle is contracting (systole) or relaxed between beats (diastole) and equate to a maximum and minimum pressure, respectively. Normal blood pressure at rest is within the range of 100-140mmHg systolic (top reading) and 60-90mmHg diastolic (bottom reading). High blood pressure is said to be present if it is persistently at or above 140/90 mmHg.

Hypertension is classified as either primary (essential) hypertension or secondary hypertension; about 90–95% of cases are categorized as "primary hypertension" which means high blood pressure with no obvious underlying medical cause. The remaining 5–10% of cases (secondary hypertension) are caused by other conditions that affect the kidneys, arteries, heart or endocrine system.

Hypertension is a major risk factor for stroke, myocardial infarction (heart attacks), heart failure, aneurysms of the arteries (e.g. aortic aneurysm), peripheral arterial disease and is a cause of chronic kidney disease. Even moderate elevation of arterial blood pressure is associated with a shortened life expectancy.

Dietary and lifestyle changes can improve blood pressure control and decrease the risk of associated health complications, although drug treatment is often necessary in people for whom lifestyle changes are not enough or not effective.

Case 1

Age: 55 years
Gender: Female
Weight: 75kg
Height: 153cm
BMI: 32kg/m2 (obese)
BP: 153/104 mmHg
Pulse: 102 bpm

BP: 153/104mmHg and Pulse 102/min
Anti-hypertensive drug: Twynsta 80mg/10mg Telmisartan/Amlodipine

Case 2 (after 2 weeks)

Age: 55 years
Gender: Female
Weight: 73.0kg
Height: 153cm
BMI: 31kg/m2 (obese)
BP: 123/80 mmHg
Pulse: 79 bpm


External links
http://en.wikipedia.org/wiki/Hypertension
http://healthintotality.blogspot.com/2013/03/hypertension-in-young-adults.html

Hepatitis A

Synonym: infectious hepatitis
Hepatitis A virus (HAV)
HAV is a picornavirus

Review (original in German)

The virus responsible for hepatitis A--hepatitis A virus (HAV)--is a small, spherical, and exceptionally resistant RNA-virus. It is transmitted preferentially by the faecal-oral route and apparently replicates exclusively in the liver. The damage of the liver ensuing from HAV infection most likely does not stem directly from virus replication but is the result of an interaction of cell mediated virus-specific immunity with infected hepatocytes. Infection is usually self limiting, yet, in individual cases may also take a protracted and even relapsing course. True chronic infections, however, are not observed. HAV has a world-wide distribution. In countries where inadequate sanitary conditions prevail, the virus persists in the environment and almost 100% of the population acquires infection in childhood. At that age, infection causes no or only minimal clinical symptoms. Infected individuals nevertheless develop protective, long lasting immunity, probably persisting for entire life. In developed, industrialized countries HAV has ceased to circulate in the environment and the general population. Here, infections predominantly occur in adults travelling to endemic areas or exposed at home to thus infected individuals or members of high risk groups (e.g. children in day care centres, i.v. drug users). With increasing age infections become more and more clinically manifest and at and beyond of adolescence more than 80% of patients develop icteric, in some cases even fulminant and fatal hepatitis. Acute hepatitis A infection can be diagnosed by demonstrating the presence of anti-HAV-IgM antibodies. Immunity following either infection or successful vaccination is assessed by measuring anti-HAV-IgG. Preventive measures rely on strict personal and alimentary hygiene as well as on vaccination with inactivated (killed) hepatitis A vaccines. These vaccines are safe, highly immunogenetic and induce long lasting (> 20 years) protection against hepatitis A. Specific antiviral therapy is not yet available.

Introduction

Hepatitis A (formerly known as infectious hepatitis) is an acute infectious disease of the liver. It is caused by the hepatitis A virus (HAV). The HAV is an RNA virus. It is usually spread by the fecal-oral route. It can be transmitted person-to-person by ingestion of contaminated food or water. It can be contracted through direct contact with an infectious person.

Tens of millions of individuals worldwide are estimated to become infected with HAV each year. The time between infection and the appearance of the symptoms (the incubation period) is between two and six weeks and the average incubation period is 28 days.

In developing countries, and in regions with poor standards of hygiene, the incidence of infection with HAV is high. The illness is usually contracted in early childhood. As incomes rise and access to clean water increases, the incidence of HAV decreases. Hepatitis A infection causes no clinical signs and symptoms in over 90% of infected children. The infection confers lifelong immunity. The disease is of no special significance to those infected early in life.

In more developed countries, in Europe, the USA and other industrialized countries, the infection is contracted primarily by susceptible young adults. Most of whom are infected with the virus during trips to countries with a high incidence of the disease. They can also contract HAV through contact with infectious persons.

HAV infection produces a self-limited disease that does not result in chronic infection or chronic liver disease. However, 10–15% of patients might experience a relapse of symptoms during the 6 months after acute illness.

Acute liver failure from Hepatitis A is rare (overall case-fatality rate: 0.5%). The risk for symptomatic infection is directly related to age, with more than 80% of adults having symptoms compatible with acute viral hepatitis and the majority of children having either asymptomatic or unrecognized infection. Antibody produced in response to HAV infection persists for life and confers protection against reinfection. The disease can be prevented by vaccination. Hepatitis A vaccines have been proven effective in controlling outbreaks worldwide.

Signs and symptoms

Early symptoms of hepatitis A infection can be mistaken for influenza. Some sufferers, especially children, exhibit no symptoms at all. Symptoms typically appear 2 to 6 weeks (the incubation period) after the initial infection.

Symptoms usually last less than 2 months, although some people can be ill for as long as 6 months:

  • Fatigue
  • Fever
  • Nausea
  • Loss of appetite (LOA)
  • Jaundice, a yellowing of the skin or whites of the eyes (sclarae) due to hyperbilirubinemia
  • Bile is removed from blood stream and excreted in urine, giving it a dark amber colour
  • Diarrhea
  • Clay-coloured faeces (lacking the usual brown pigment)


Virology

Following ingestion, HAV enters the bloodstream through the epithelium of the oropharynx or intestine. The blood carries the virus to its target, the liver, where it multiplies within hepatocytes (liver cells) and Kupffer cells (liver macrophages).

Virions are secreted into the bile (hempedu) and released in stool. HAV is excreted in large quantities approximately 11 days prior to appearance of symptoms or anti-HAV IgM antibodies in the blood.

The incubation period is 15–50 days and mortality is less than 0.5%. Within the liver hepatocytes the RNA genome is released from the protein coat and is translated by the cell's own ribosomes.

Unlike other members of the Picornaviruses this virus requires an intact eukaryote initiating factor 4G (eIF4G) for the initiation of translation. The requirement for this factor results in an inability to shut down host protein synthesis unlike other picornaviruses.

The virus must then inefficiently compete for the cellular translational machinery which may explain its poor growth in cell culture. Presumably for this reason the virus has strategically adopted a naturally highly deoptimized codon usage with respect to that of its cellular host. Precisely how this strategy works is not quite clear yet.

There is no apparent virus-mediated cytotoxicity presumably because of the virus' own requirement for an intact eIF4G and liver pathology is likely immune-mediated.

Structure

The Hepatitis A virus (HAV) is a Picornavirus; it is non-enveloped and contains a single-stranded RNA packaged in a protein shell. There is only one serotype of the virus, but multiple genotypes exist. Codon use within the genome is biased and unusually distinct from its host. It also has a poor internal ribosome entry site. In the region that codes for the HAV capsid, there are highly conserved clusters of rare codons that restrict antigenic variability.

Transmission

The virus spreads by the fecal-oral route. Infections often occur in conditions of poor sanitation and overcrowding. Hepatitis A can be transmitted by the parenteral route but very rarely by blood and blood products.

Food-borne outbreaks are not uncommon. Ingestion of shellfish cultivated in polluted water is associated with a high risk of infection. Approximately 40% of all acute viral hepatitis is caused by HAV.

Infected individuals are infectious prior to onset of symptoms, roughly 10 days following infection.

The virus is resistant to detergent, acid (pH 1), solvents (e.g., ether, chloroform), drying, and temperatures up to 60 °C. It can survive for months in fresh and salt water.

Common-source (e.g., water, restaurant) outbreaks are typical.

Infection is common in children in developing countries, reaching 100% incidence, but following infection there is lifelong immunity.

HAV can be inactivated by: chlorine treatment (drinking water), formalin (0.35%, 37 °C, 72 hours), peracetic acid (2%, 4 hours), beta-propiolactone (0.25%, 1-hour), and UV radiation (2 μW/cm2/min).

Diagnosis

(i) Serum IgG and IgM

Two antibodies are used to detect HAV infection, HAV-specific IgM and HAV-specific IgG. Antibodies to HAV (anti-HAV) in the blood are a marker of past or current infection.

  • HAV-specific IgM are used to detect present HAV infection.
  • HAV-specific IgG are used to detect past HAV infection.
Although HAV is excreted in the faeces towards the end of the incubation period, specific diagnosis is made by the detection of HAV-specific IgM antibodies in the blood. IgM antibody is only present in the blood following an acute hepatitis A infection. It is detectable from one to two weeks after the initial infection and persists for up to 14 weeks.

The presence of IgG antibody in the blood means that the acute stage of the illness is past and the person is immune to further infection. IgG antibody to HAV is also found in the blood following vaccination and tests for immunity to the virus are based on the detection of this antibody.

(ii) Hepatitis serological panel

Serological markers of acute hepatitis: HBsAg, HBcIgM, anti-HCV, HEV-IgM, and HAV-IgM.
Serological markers of chronic hepatitis: HBsAg, HBcIgG, HBeAg, and anti-HCV.

(iii) Serum ALT

During the acute stage of the infection, the liver enzyme alanine transferase (ALT) is present in the blood at levels much higher than is normal. The enzyme comes from the liver cells (hepatocytes) that have been damaged by the virus.

(iv) EM: Presence of HAV particles in blood and faeces

HAV is present in blood and faeces. It can be detected by electron microscopy (EM).

Hepatitis A virus is present in the blood (viremia) and faeces of infected people up to two weeks before clinical illness develops.

Prevention

Hepatitis A can be prevented by vaccination, good hygiene and sanitation.

For information about the vaccine, its properties, and its application, see Hepatitis A vaccine.

There are two types of vaccines: one containing inactivated hepatitis A virus, and another containing a live but attenuated virus.

Both provide active immunity against a future infection.

The vaccine protects against HAV in more than 95% of cases for longer than 25 years.

In the USA the vaccine was first phased in 1996 for children in high-risk areas, and in 1999 it was spread to areas with elevating levels of infection.

The vaccine is given by injection.

An initial dose provides protection starting two to four weeks after vaccination; the second booster dose, given six to twelve months later, provides protection for over twenty years.

Vaccination programmes

The vaccine was introduced in 1992 and was initially recommended for persons at high risk.

Since then Bahrain and Israel have embarked on eradication programmes.

Australia, China, Belarus, Italy, Spain and the USA have started similar programmes.

The incidence of hepatitis A where widespread vaccination has been practised has decreased dramatically.

In China and the USA the incidence of hepatitis A has decreased by 90% since 1990.

Treatment

There is no specific treatment for hepatitis A.

(i) The normal doctors' advice

Sufferers are advised to rest, avoid fatty foods and alcohol (these may be poorly tolerated for some additional months during the recovery phase and cause minor relapses), eat a well-balanced diet, and stay hydrated.

(ii) Traditional Malay advice

In the Malay World, the elderly will advise to take fresh goat's milk with infusion of the dukung anak plant. These are taken twice a day. This clears HAV infection within 2 weeks (as opposed to 1 month in the usual course of HAV clearance). The dukung anak plant is a common garden weed.

Prognosis

The United States Centers for Disease Control and Prevention (CDC) in 1991 reported a low mortality rate for hepatitis A of 4 deaths per 1000 cases for the general population but a higher rate of 17.5 per 1000 in those aged 50 and over.

The risk of death from acute liver failure following HAV infection increases with age and when the person has underlying chronic liver disease.

Young children that are infected with hepatitis A typically have a milder form of the disease, usually lasting from 1–3 weeks, whereas adults tend to experience a much more severe form of the disease.

Epidemiology

High-income regions (Western Europe, Australia, New Zealand, Canada, the United States, Japan, the Republic of Korea, and Singapore) have very low HAV endemicity levels and a high proportion of susceptible adults.

Low-income regions (sub-Saharan Africa and parts of South Asia) have high endemicity levels and almost no susceptible adolescents and adults.

Most middle-income regions have a mix of intermediate and low endemicity levels.

Anti-HAV prevalence suggest that middle-income regions in Asia, Latin America, Eastern Europe, and the Middle East currently had an intermediate or low level of endemicity in 2005. The countries in these regions may have an increasing burden of disease from hepatitis A.

Globally, in 2010, acute hepatitis A resulted in 102,000 deaths which is slightly up from 99,000 in 1990.

There were 30,000 cases of Hepatitis A reported to the CDC in the U.S. in 1997. There were as many as 270,000 cases each year from 1980 through 2000.

Approximately one third of the US population has been infected by hepatitis A, most of whom go undiagnosed.

Genotypes

Only one serotype and seven different genetic groups (four humans and three simian) have been described.

The human genotypes are numbered I-III. Six subtypes have been described (IA, IB, IIA, IIB, IIIA, IIIB).

The simian (monkey) genotypes have been numbered IV-VI.

A single isolate of genotype VII isolated from a human has also been described.

Genotype III has been isolated from both humans and owl monkeys.

Most human isolates are of genotype I. Of the type I isolates subtype IA accounts for the majority. The mutation rate in the genome has been estimated to be 1.73 - 9.76 x 10−4 nucleotide substitution per site per year.

Cases

(i) USA - tainted green onions

The most widespread hepatitis A outbreak in the 2003 United States hepatitis outbreak afflicted at least 640 people (killing four) in north-eastern Ohio and south-western Pennsylvania in late 2003. The outbreak was blamed on tainted green onions at a restaurant in Monaca, Pennsylvania.

(ii) USA - recall of frozen berries

In June 2013, frozen berries sold by US retailer Costco and purchased by around 240,000 people were the subject of a recall, after at least 158 people were infected with HAV, 69 of whom were hospitalized.

(iii) China - contaminated river clams

In 1988, more than 300,000 people in Shanghai, China were infected with HAV after eating clams (Anadara subcrenata) from a contaminated river.

(iv) Italy

During the period 1985-1994, 25553 viral hepatitis cases were reported. Of these, 6408 (25%) were due to hepatitis A (HAV).

(v) Brazil

The prevalence of hepatitis A varies greatly in different Brazilian regions, from 56% in South and Southeast to 93% in North region (Manaus, Amazon). Such differences are also found in different socioeconomic levels among age groups.

(vi) India

Hepatitis A (HAV) is endemic in India and most of the population is infected asymptomatically in early childhood with lifelong immunity. Because of altered epidemiology and decreasing endemicity, the pattern of acute HAV infection is changing from asymptomatic childhood infection to an increased incidence of symptomatic disease in the 18-40 age group. Sera collected from 3495 patients with acute (1932) and chronic (1563) liver disease attending the Medical Outpatient Department of Lok Nayak Hospital during the previous five years (1999-2003) were tested for various serological markers of acute (HBsAg, HBcIgM, anti-HCV, HEV-IgM, and HAV-IgM) and chronic (HBsAg, HBcIgG, HBeAg, and anti-HCV) hepatitis. In addition, 500 normal healthy attendants of the patients above the age of 15 years were tested for IgG anti-HAV as controls. Of 1932 patients with acute viral hepatitis, 221 (11.4%) were positive for immunoglobulin M (IgM) anti-HAV. The patients who were IgM anti-HAV negative included hepatitis B (321 patients), C (39 patients), E (507 patients) and unclassified (844 patients). Although the frequency of HAV infection among children had increased (10.6% to 22.0%) in the 5-year period, the frequency of HAV infection among adults had also increased (3.4% to 12.3%) during the same period. A total of 300 patients with chronic liver diseases that were etiologically related to hepatitis B (169), C (73) or dual infection (10) and alcoholic liver injury (48) were tested for the presence of IgG anti-HAV antibody; 98% (294/300) were positive for the antibody. Although universal vaccination against HAV is not currently indicated, selective vaccination of the high-risk population, based on their serological evidence of HAV antibody, would be a rational and cost-effective approach.

(vii) Argentina

Hepatitis A virus (HAV) has shown intermediate endemicity in Argentina. Its incidence has decreased since the HAV vaccine was introduced in 2005. Environmental surveillance was conducted in 5 rivers from Argentina from 2005 to 2012. HAV detection decreased since 2005. It is being circulated, maintaining viral diversity but not undergoing antigenic drift. Most sequences belonged to subgenotype IA, closely related to Argentinean clinical sequences. However, one belonged to proposed subgenotype IC, previously undetected in the country. Environmental surveillance might contribute to monitoring the single-dose vaccination schedule.

Implications of HAV infection to Malaysian food imports

Malaysia imports its beef or beef cattles from Argentina and India. It is important that the Malaysian authorities are strict with hepatitis A infection in frozen beef (daging beku) coming from overseas. Malaysia's high beef consumption hovers around the two festive seasons that are celebrated nationwide - Aidilfitri and Aidiladha.

Malaysians have started consuming milk and milk products from overseas since the 1980s. They include fresh and flavoured milk, ice-creams, yoghurts and yoghurt drinks. Food poisoning has been reported from primary schools but there are no reports of HAV infection from dairy produce.


External links
http://en.wikipedia.org/wiki/Hepatitis_A
Southscience.pbworks.com: "Hepatitis A."
Health-advisors.org: "Hepatitis-a-symptoms."
Abcnews.go.com: "Frozen-berries-recalled-over-hepatitis-fears."
Food.com: "Green-onion."
Sciencedirect.com/Clinical course and consequences of hepatitis A infection."
http://www.ncbi.nlm.nih.gov/pubmed/10683554
http://www.ncbi.nlm.nih.gov/pubmed/9126784
http://www.ncbi.nlm.nih.gov/pubmed/15771857
http://www.ncbi.nlm.nih.gov/pubmed/14579471
http://www.ncbi.nlm.nih.gov/pubmed/16677154
http://www.ncbi.nlm.nih.gov/pubmed/23072283
Emedicinehealth.com: "Hepatitis A Symptoms."